Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877315.1_cds_XP_016436437.1_32295
CDS Infomation

[gene=LOC107762580] [db_xref=GeneID:107762580] [protein=uncharacterized protein LOC107762580] [protein_id=XP_016436437.1] [location=join(104683..104854,105082..105263,105377..105994,106068..106145,107887..108205,108308..108507,109115..109191,109474..109575,109803..109989,110263..110358)] [gbkey=CDS]
Sequence

ATGGGAGCAGGGAGAAGAACGCAGACCTTTGTATTTGATTCTGCATCATCACTACCCAAC
CAGACAAGCTACACTGGAGATTTTAGATACTTGACGAAAAGAAAACTTGGCGGTGTCATA
TTTGGTTGCACGAATGATACCATGAAAGAATGTCTATGTAAACAGCTATTTGGTTTGCCT
GCTAAACATTTTTCATATGTGAAGAACATAGATCCAGGTCTGCCACTGTTTTTGTTCAAC
TACAGCAATAAGGAGCTTCATGGTATTTTTGAAGCTGCAAGCTCTGGAGCAATGTCTATC
AATCCATATGCTTGGACACAGGACGGTTCTGGAAGAACACTATATCCTGCTCAGGTTCAG
ATGCGTGTCCGTCTGCAGTGCCAACCACTTCCAGAAAGTCTGTTTAAACCTATAATTCTG
GATAACTATTACAATCAGAACCATTTCTTATTTGAGCTAGATCATGTTCAAGCTGGTAAA
TTGATCTCCAAGCTCTCATCTCTTGAATTTGCTCCAAGCAGCTGCATGCCGGAGAATGCA
GCTACATGGAGAAATATAATACAAGGTTTACCGGCAAAAGACAATAGAGAGGAAAATGGT
CAATCCGAGCCACAAGACTTGAAAGAAAATTTTGTCAACCCACTTGATTTAAATGGGAAT
TTTGGTGGGGGAGACATTTTTCTTTGTCCTAATGGCGCTGACCAGCAGCTGGAGGCACCA
TTAGATAATCAAGTAGAATTATATGATAAGGATCTTATACACACGGAAATTAGAGAATTG
GCTATTCAACATGAATGCTCAGGGACCTCTATAAATGGGCATGCAGAGGAAAGCACTAAT
GCAGTGACGAATGCCACTATAAATGATGTAAAGATTGGGCAAGAAACTTTTAAGAAAACA
CAGACAATGAGAGAGGAAAAGAATGAAGAAAGCTCGTCTGACTTGGCTGTCTATCCTGAT
ATTATAGCTCAGCTGCTTCAAGGAATGGAAGAATTGAAAGCTTCTAAGGAGGCGCAAACT
CATAAGATGTGTAGTTTGGAGCAGAAGCTGGCCGATGCAAGAGAAGAGATTAAGCAGTTA
AAATATAAATATTTCATGCCTGAGTCCTCAATTCCGTCATGTCAATTGGCTGATGAAACA
GTGTTTGAGCCAGTTGATCAAGTATTGCTGGATCCTGAGTCAATCATCCTAGCCGGAGGA
TATGACGGGGTATCATGGTTATCTACCTTGGAGTCATACTCACTTTCAAATGATGTGTTA
AAGTCTCTTAAGCCAATGAGTTCAGTTCGATCATATGCCTCAGTTGCAAAACTGTGTGGA
GAGCTTTATGTATTTGGTGGCGGAACTGGAAGCTTGTGGTACGACACAGTTGAATCATAT
AATCCAGCAGATAACGAGTGGACCCTACATCCTTCCTTGAATAAGAAAAAGGGTAGTTTA
GCTGGTGCTACTTTGAAGGACAAAATTTTTGCAATTGGCGGTAGCAATGGGATTGACTGC
TTTTCAGAGGTCGAGATGTATGATCCTCTAGTAGAGCGTTGGATTTCTACAAGATCCATG
TTGCAGAAGCGATTTTCTCTTGCTGCAGCAGAACTCAATGGTGCGTTATATGCTGTTGGT
GGATATGATGGAAGCAATTACCTGGCGACTGCTGAAAGATTTGATCCCAGAGAACATTCC
TGGACAAAAATTAAGAATATGAGTACGAGCAGAGGATGCCATGCATTGGCTGTGTTGGAC
GGGAAGTTATACGCACTTGGTGGGTACGATGGGTCTACAATGGTGCCTAACACTGAGATA
TATGATCCCCGTCTTGCAACATGGATGGTTGGGGAGCCAATGAAGCACTCGAGAGGGTAT
TCAGCAGCTGTTGTTCTACATGAGTCCATTTATGTGATTGGAGGGGTTCAACCTGGTGAG
GAAGTTGTAGACGTGATCGAATGTTATAAGGAGGGTCAAGGTTGGCAAACACCCAACTTG
AGGGGAATAGGGAAAAGGTGTTTCTGCTCAGCTATAGTATTGGAAGACTGA

Peptide Sequence

PEP ID

XP_016436437.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107762580 [Nicotiana tabacum]
Sequence

MGAGRRTQTFVFDSASSLPNQTSYTGDFRYLTKRKLGGVIFGCTNDTMKECLCKQLFGLP
AKHFSYVKNIDPGLPLFLFNYSNKELHGIFEAASSGAMSINPYAWTQDGSGRTLYPAQVQ
MRVRLQCQPLPESLFKPIILDNYYNQNHFLFELDHVQAGKLISKLSSLEFAPSSCMPENA
ATWRNIIQGLPAKDNREENGQSEPQDLKENFVNPLDLNGNFGGGDIFLCPNGADQQLEAP
LDNQVELYDKDLIHTEIRELAIQHECSGTSINGHAEESTNAVTNATINDVKIGQETFKKT
QTMREEKNEESSSDLAVYPDIIAQLLQGMEELKASKEAQTHKMCSLEQKLADAREEIKQL
KYKYFMPESSIPSCQLADETVFEPVDQVLLDPESIILAGGYDGVSWLSTLESYSLSNDVL
KSLKPMSSVRSYASVAKLCGELYVFGGGTGSLWYDTVESYNPADNEWTLHPSLNKKKGSL
AGATLKDKIFAIGGSNGIDCFSEVEMYDPLVERWISTRSMLQKRFSLAAAELNGALYAVG
GYDGSNYLATAERFDPREHSWTKIKNMSTSRGCHALAVLDGKLYALGGYDGSTMVPNTEI
YDPRLATWMVGEPMKHSRGYSAAVVLHESIYVIGGVQPGEEVVDVIECYKEGQGWQTPNL
RGIGKRCFCSAIVLED

Transcript Sequence

Gene sequence data has not been registered.